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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903715.1_cds_XP_016453823.1_47913
CDS Infomation

[gene=LOC107778133] [db_xref=GeneID:107778133] [protein=dynamin-related protein 1E-like] [protein_id=XP_016453823.1] [location=complement(join(172183..172311,172959..173354,173456..173506,173609..173834,180735..180805,180887..181006,181090..181284,182072..182136,182235..182325,183211..183272,183354..183404,183632..183787,184590..184701,185074..185214))] [gbkey=CDS]
Sequence

ATGACGACGATGGGGAGCTTAATAGGTTTAGTGAACAGAATTCAGATGGCATGTACTGCT
CTTGGTGATTATGGCGGCGGCGATAACTCTTTCTCTTCTCTTTGGGATGAACTTCCCTCT
GTTGCCGTCGTCGGTGGTCAGAGTTCAGGGAAGTCGTCTGTGTTGGAAAGTATAGTGGGA
CGAGATTTTCTTCCACGAGGATCAGGTAACGCCATTTTGGATCAATTCGATTTTGTTATA
TTATTGATGATCATTACTGGATGCTGGTGCAAAAGATGTGATTTTTATACGTTCTTTGCT
TTTACAGACCTCGTACGCAGGGAGATTCAGGATGAAACTGACAGAGTCACAGGGAAAACA
AAGCAGATTTCTCCTGTTCCTATCCACTTGAGCATATATTCCCCAAATGTGGTCAACTTA
ACACTGATTGATTTACCTGGTTTGACCAAAGTTGCTGTTGAGGAGCAGCCTGAGAGTGTT
GTCAAAGACATTGAAGACATGGTTCAATCTTACGTTGCAAAGCCCAACTGCATCATACTA
GCAATTTCTCCTGCGAATCAGGATATTGCCACGTCAGATGCTATAAAACTTTCAAGGGAA
GTAGATCCCACAGGAGAACGGACATTTGGCGTGTTGACCAAGCTTGATTTGATGGATAAA
GGGACTAATGCTTTAGATGTTCTAGAAGGAAGGGCTTATCTTTTGCAATATCCTTGGGTT
GGAATCGTGAATCGTTCACAAGCTGATATAAATAAAAATGTGGACATGATCTATGCGAGA
AGGAAGGAGCGTGAATATTTTGCAAGCAGTCCTGACTATGGGCATCTGGCTAGTAAAATG
GGTTCAGAATATCTTGCAAAACTTCTCTCGAAGCACTTGGAGTCTGTAATTCTAGCTAAA
ATACCGGGCATCACCTCAGTTATTAATAAAGGCATAGATGAACTTGAATCTGAGATGGAC
CACCTTGGGAGGCCTATTGCTGTTGATGCAGGGGCACAATTGTATACTATCTTGGAACTT
TGCCGTGCTTTTGACAAGATATTCAAAGAGCATCTGGATGGAGGCCGACCAGGAGGTGAT
CGAATTTATGGAGTTTTTGACAATCAGCTTCCTGCTGCTTTAAGAAAACTCCCATTTGAC
CGGCATCTTTCAATACAAAATGTGAGAAAAGTTGTCTCAGAGGCAGATGGATATCAGCCT
CATTTGATTGCACCTGAGCAAGGTTATAGACGGCTTATTGAGGGAGCACTAAATTATTAT
AGAGGGCCAGCTGAAGCCTCAGTAGATGCTGTTCACTTTGTCTTAAAGGAACTTGTGAGG
AATTCAGTCGGAGAATGTCAGGAGTTGAAGCGGTTTCCCAGTCTGCAATCTGCAATAGCT
GTGGCCTCGTATGAAGCCTTGGAAAAATTTCGCGATGAAGGTAGAAAGACAGTCGTAAGA
CTGGTGGACATGGAATCCTCCTATCTGACAGTGGATTTTTTCAGAAAACTTCCTCAGGAA
GTGGAGAAAGGGGGGAATCCAGCAACTACTAAAGGGGGAAATCCAGCAGCTACTCCTGTT
GTAGACCGGCATGCAGAGGGTCACTTTAGGAGGATTGGTTCAAATGTATCATCTTATGTA
AATATGGTGACCGATACGCTGAGGAACACTATCCCTAAAGCAGTGGTTTATTGCCAAGTT
AAGGAGGCCAAACAATCTCTACTAAATCACTTCTACACTCAAATTGGGAAGAAAGAGGGC
AAGGAACTTGCAGAATTGTTAGATGAAGACCCAGCTTTGATGGAGAAAAGAGTGCAATGT
GCTAAGAGGCTTGAACTATACAAGAAAGCAAGAGATGAAATTGATTCTGTATCGTCGGTT
CGATGA

Peptide Sequence

PEP ID

XP_016453823.1
PEP Infomation

PREDICTED: dynamin-related protein 1E-like [Nicotiana tabacum]
Sequence

MTTMGSLIGLVNRIQMACTALGDYGGGDNSFSSLWDELPSVAVVGGQSSGKSSVLESIVG
RDFLPRGSGNAILDQFDFVILLMIITGCWCKRCDFYTFFAFTDLVRREIQDETDRVTGKT
KQISPVPIHLSIYSPNVVNLTLIDLPGLTKVAVEEQPESVVKDIEDMVQSYVAKPNCIIL
AISPANQDIATSDAIKLSREVDPTGERTFGVLTKLDLMDKGTNALDVLEGRAYLLQYPWV
GIVNRSQADINKNVDMIYARRKEREYFASSPDYGHLASKMGSEYLAKLLSKHLESVILAK
IPGITSVINKGIDELESEMDHLGRPIAVDAGAQLYTILELCRAFDKIFKEHLDGGRPGGD
RIYGVFDNQLPAALRKLPFDRHLSIQNVRKVVSEADGYQPHLIAPEQGYRRLIEGALNYY
RGPAEASVDAVHFVLKELVRNSVGECQELKRFPSLQSAIAVASYEALEKFRDEGRKTVVR
LVDMESSYLTVDFFRKLPQEVEKGGNPATTKGGNPAATPVVDRHAEGHFRRIGSNVSSYV
NMVTDTLRNTIPKAVVYCQVKEAKQSLLNHFYTQIGKKEGKELAELLDEDPALMEKRVQC
AKRLELYKKARDEIDSVSSVR

Transcript Sequence

Gene sequence data has not been registered.